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<html xmlns:v="urn:schemas-microsoft-com:vml" xmlns:o="urn:schemas-microsoft-com:office:office" xmlns:w="urn:schemas-microsoft-com:office:word" xmlns:m="http://schemas.microsoft.com/office/2004/12/omml" xmlns="http://www.w3.org/TR/REC-html40"> <head> <meta http-equiv="Content-Type" content="text/html; charset=windows-1257"> <meta name="Generator" content="Microsoft Word 15 (filtered medium)"> <style></style> </head> <body lang="EN-NZ" link="#0563C1" vlink="#954F72"> <div class="WordSection1"> Whoops, the second netcdf file isnt working either. <o:p></o:p> <o:p> </o:p> <div> <div style="border:none;border-top:solid #E1E1E1 1.0pt;padding:3.0pt 0cm 0cm 0cm"> From: thredds <thredds-bounces@unidata.ucar.edu> On Behalf Of Phil Scadden Sent: Friday, 7 August 2020 10:05 To: thredds@unidata.ucar.edu Subject: [thredds] Limit on diminsion when using Godiva?<o:p></o:p> </div> </div> <o:p> </o:p> We have a 5D netCDF which works fine in Panoply, but when we try to use it in thredds, we don�t get a list of variable. Digging deeper, I see that call to /thredds/wms/gwAll/hpm_outputs.nc?item=menu&menu=&request=GetMetadata returns:<o:p></o:p> <o:p> </o:p> {"label":"GNS Thredds","children":[{"label":"hpm model outputs","children":[]}]} I don�t see any errors reports in the threddsServlet.log. <o:p></o:p> <o:p> </o:p> A very similar file in the same datascan but with one less dimension is working ok.<o:p></o:p> <o:p> </o:p> The header for the failing file is:<o:p></o:p> netcdf hpm_outputs {<o:p></o:p> dimensions:<o:p></o:p> lay = 8 ;<o:p></o:p> x = 501 ;<o:p></o:p> y = 302 ;<o:p></o:p> realn = 91 ;<o:p></o:p> datetime = 76 ;<o:p></o:p> variables:<o:p></o:p> char transverse_mercator ;<o:p></o:p> transverse_mercator:grid_mapping_name = "transverse_mercator" ;<o:p></o:p> transverse_mercator:longitude_of_central_meridian = 173. ;<o:p></o:p> transverse_mercator:false_easting = 1600000. ;<o:p></o:p> transverse_mercator:false_northing = 10000000. ;<o:p></o:p> transverse_mercator:latitude_of_projection_origin = 0. ;<o:p></o:p> transverse_mercator:scale_factor_at_central_meridian = 0.9996 ;<o:p></o:p> transverse_mercator:long_name = "CRS definition" ;<o:p></o:p> transverse_mercator:longitude_of_prime_meridian = 0. ;<o:p></o:p> transverse_mercator:semi_major_axis = 6378137. ;<o:p></o:p> transverse_mercator:semi_minor_axis = 6356752.31414036 ;<o:p></o:p> transverse_mercator:reference_ellipsoid_name = "GRS 1980" ;<o:p></o:p> transverse_mercator:prime_meridian_name = "Greenwich" ;<o:p></o:p> transverse_mercator:geographic_crs_name = "NZGD2000" ;<o:p></o:p> transverse_mercator:horizontal_datum_name = "New Zealand Geodetic Datum 2000" ;<o:p></o:p> transverse_mercator:projected_crs_name = "NZGD2000 / New Zealand Transverse Mercator 2000" ;<o:p></o:p> transverse_mercator:inverse_flattening = 298.257222101 ;<o:p></o:p> transverse_mercator:spatial_ref = "PROJCRS[\"NZGD2000 / New Zealand Transverse Mercator 2000\",BASEGEOGCRS[\"NZGD2000\",DATUM[\"New Zealand Geodetic Datum 2000\",ELLIPSOID[\"GRS 1980\",6378137,298.257222101,LENGTHUNIT[\"metre\",1]]],PRIMEM[\"Greenwich\",0,ANGLEUNIT[\"degree\",0.0174532925199433]], ID[\"EPSG\",4167]],CONVERSION[\"New Zealand Transverse Mercator 2000\",METHOD[\"Transverse Mercator\", ID[\"EPSG\",9807]],PARAMETER[\"Latitude of natural origin\",0,ANGLEUNIT[\"degree\",0.0174532925199433], ID[\"EPSG\",8801]],PARAMETER[\"Longitude of natural origin\",173,ANGLEUNIT[\"degree\",0.0174532925199433], ID[\"EPSG\",8802]],PARAMETER[\"Scale factor at natural origin\",0.9996,SCALEUNIT[\"unity\",1],ID[\"EPSG\",8805]],PARAMETER[\"False easting\",1600000,LENGTHUNIT[\"metre\",1],ID[\"EPSG\",8806]],PARAMETER[\"False northing\",10000000,LENGTHUNIT[\"metre\",1],ID[\"EPSG\",8807]]], CS[Cartesian,2], AXIS[\"northing (N)\",north,ORDER[1],LENGTHUNIT[\"metre\",1]], AXIS[\"easting (E)\",east,ORDER[2],LENGTHUNIT[\"metre\",1]],USAGE[SCOPE[\"unknown\"],AREA[\"New Zealand - onshore\"],BBOX[-47.33,166.37,-34.1,178.63]],ID[\"EPSG\",2193]]" ;<o:p></o:p> int lay(lay) ;<o:p></o:p> lay:standard_name = "(no standard name)" ;<o:p></o:p> lay:long_name = "Model layer" ;<o:p></o:p> double x(x) ;<o:p></o:p> x:standard_name = "projection_x_coordinate" ;<o:p></o:p> x:long_name = "x coordinate of projection" ;<o:p></o:p> x:units = "m" ;<o:p></o:p> double y(y) ;<o:p></o:p> y:standard_name = "projection_y_coordinate" ;<o:p></o:p> y:long_name = "y coordinate of projection" ;<o:p></o:p> y:units = "m" ;<o:p></o:p> string realn(realn) ;<o:p></o:p> realn:long_name = "Realisation" ;<o:p></o:p> realn:standard_name = "realization" ;<o:p></o:p> int64 datetime(datetime) ;<o:p></o:p> datetime:standard_name = "(no standard name)" ;<o:p></o:p> datetime:long_name = "Datetime" ;<o:p></o:p> datetime:units = "YYYYMMDD" ;<o:p></o:p> float head(realn, datetime, lay, y, x) ;<o:p></o:p> head:_FillValue = -1.e+30f ;<o:p></o:p> head:grid_mapping = "transverse_mercator" ;<o:p></o:p> head:long_name = "Simulated GW Head" ;<o:p></o:p> head:standard_name = "(no standard name)" ;<o:p></o:p> head:units = "m" ;<o:p></o:p> float s_flow(realn, datetime, y, x) ;<o:p></o:p> s_flow:_FillValue = -1.e+30f ;<o:p></o:p> s_flow:grid_mapping = "transverse_mercator" ;<o:p></o:p> s_flow:long_name = "Simulated Stream Flow" ;<o:p></o:p> s_flow:standard_name = "(no standard name)" ;<o:p></o:p> s_flow:units = "m3/d" ;<o:p></o:p> float s_flux(realn, datetime, y, x) ;<o:p></o:p> s_flux:_FillValue = -1.e+30f ;<o:p></o:p> s_flux:grid_mapping = "transverse_mercator" ;<o:p></o:p> s_flux:long_name = "Simulated Stream Flux to GW" ;<o:p></o:p> s_flux:standard_name = "(no standard name)" ;<o:p></o:p> s_flux:units = "m3/d" ;<o:p></o:p> <o:p> </o:p> // global attributes:<o:p></o:p> :title = "hpm model outputs" ;<o:p></o:p> :description = "ensemble simulated outputs" ;<o:p></o:p> :file_creation_time = "2020-08-03 15:03:00.336462" ;<o:p></o:p> :Conventions = "CF-1.7" ;<o:p></o:p> :institution = "GNS Science" ;<o:p></o:p> :source = "PEST++/pyEMU" ;<o:p></o:p> }<o:p></o:p> <o:p> </o:p> And for the good file is:<o:p></o:p> netcdf hpm_inputs {<o:p></o:p> dimensions:<o:p></o:p> lay = 8 ;<o:p></o:p> x = 501 ;<o:p></o:p> y = 302 ;<o:p></o:p> realn = 100 ;<o:p></o:p> variables:<o:p></o:p> char transverse_mercator ;<o:p></o:p> transverse_mercator:grid_mapping_name = "transverse_mercator" ;<o:p></o:p> transverse_mercator:longitude_of_central_meridian = 173. ;<o:p></o:p> transverse_mercator:false_easting = 1600000. ;<o:p></o:p> transverse_mercator:false_northing = 10000000. ;<o:p></o:p> transverse_mercator:latitude_of_projection_origin = 0. ;<o:p></o:p> transverse_mercator:scale_factor_at_central_meridian = 0.9996 ;<o:p></o:p> transverse_mercator:long_name = "CRS definition" ;<o:p></o:p> transverse_mercator:longitude_of_prime_meridian = 0. ;<o:p></o:p> transverse_mercator:semi_major_axis = 6378137. ;<o:p></o:p> transverse_mercator:semi_minor_axis = 6356752.31414036 ;<o:p></o:p> transverse_mercator:reference_ellipsoid_name = "GRS 1980" ;<o:p></o:p> transverse_mercator:prime_meridian_name = "Greenwich" ;<o:p></o:p> transverse_mercator:geographic_crs_name = "NZGD2000" ;<o:p></o:p> transverse_mercator:horizontal_datum_name = "New Zealand Geodetic Datum 2000" ;<o:p></o:p> transverse_mercator:projected_crs_name = "NZGD2000 / New Zealand Transverse Mercator 2000" ;<o:p></o:p> transverse_mercator:inverse_flattening = 298.257222101 ;<o:p></o:p> transverse_mercator:spatial_ref = "PROJCRS[\"NZGD2000 / New Zealand Transverse Mercator 2000\",BASEGEOGCRS[\"NZGD2000\",DATUM[\"New Zealand Geodetic Datum 2000\",ELLIPSOID[\"GRS 1980\",6378137,298.257222101,LENGTHUNIT[\"metre\",1]]],PRIMEM[\"Greenwich\",0,ANGLEUNIT[\"degree\",0.0174532925199433]], ID[\"EPSG\",4167]],CONVERSION[\"New Zealand Transverse Mercator 2000\",METHOD[\"Transverse Mercator\", ID[\"EPSG\",9807]],PARAMETER[\"Latitude of natural origin\",0,ANGLEUNIT[\"degree\",0.0174532925199433], ID[\"EPSG\",8801]],PARAMETER[\"Longitude of natural origin\",173,ANGLEUNIT[\"degree\",0.0174532925199433], ID[\"EPSG\",8802]],PARAMETER[\"Scale factor at natural origin\",0.9996,SCALEUNIT[\"unity\",1],ID[\"EPSG\",8805]],PARAMETER[\"False easting\",1600000,LENGTHUNIT[\"metre\",1],ID[\"EPSG\",8806]],PARAMETER[\"False northing\",10000000,LENGTHUNIT[\"metre\",1],ID[\"EPSG\",8807]]], CS[Cartesian,2], AXIS[\"northing (N)\",north,ORDER[1],LENGTHUNIT[\"metre\",1]], AXIS[\"easting (E)\",east,ORDER[2],LENGTHUNIT[\"metre\",1]],USAGE[SCOPE[\"unknown\"],AREA[\"New Zealand - onshore\"],BBOX[-47.33,166.37,-34.1,178.63]],ID[\"EPSG\",2193]]" ;<o:p></o:p> int lay(lay) ;<o:p></o:p> lay:standard_name = "(no standard name)" ;<o:p></o:p> lay:long_name = "Model layer" ;<o:p></o:p> double x(x) ;<o:p></o:p> x:standard_name = "projection_x_coordinate" ;<o:p></o:p> x:long_name = "x coordinate of projection" ;<o:p></o:p> x:units = "m" ;<o:p></o:p> double y(y) ;<o:p></o:p> y:standard_name = "projection_y_coordinate" ;<o:p></o:p> y:long_name = "y coordinate of projection" ;<o:p></o:p> y:units = "m" ;<o:p></o:p> string realn(realn) ;<o:p></o:p> realn:long_name = "Realisation" ;<o:p></o:p> realn:standard_name = "realization" ;<o:p></o:p> float K(realn, lay, y, x) ;<o:p></o:p> K:_FillValue = -1.e+30f ;<o:p></o:p> K:grid_mapping = "transverse_mercator" ;<o:p></o:p> K:long_name = "Hydraulic conductivity" ;<o:p></o:p> K:standard_name = "(no standard name)" ;<o:p></o:p> K:units = "m day-1" ;<o:p></o:p> <o:p> </o:p> // global attributes:<o:p></o:p> :title = "hpm model pars" ;<o:p></o:p> :description = "ensemble parameters for MODFLOW" ;<o:p></o:p> :file_creation_time = "2020-08-03 13:14:55.609150" ;<o:p></o:p> :Conventions = "CF-1.7" ;<o:p></o:p> :institution = "GNS Science" ;<o:p></o:p> :source = "PEST++/pyEMU" ;<o:p></o:p> }<o:p></o:p> <o:p> </o:p> <a href="https://data-dev.gns.cri.nz/thredds/wms/gwAll/hpm_outputs1.nc?item=menu&menu=&request=GetMetadata">https://data-dev.gns.cri.nz/thredds/wms/gwAll/hpm_outputs1.nc?item=menu&menu=&request=GetMetadata</a><o:p></o:p> <o:p> </o:p> ________________________________________________<o:p></o:p> Ng� mihi, N� Phil Scadden<o:p></o:p> Te Aroturuki Matep� Aronuku me te P�taiao Raraunga<o:p></o:p> GNS Science Ltd 764 Cumberland St, Private Bag 1930, <o:p></o:p> Dunedin, New Zealand Ph +64 3 4799663, 027 3463185<o:p></o:p> <o:p> </o:p> �Wh�ia te iti kahurangi ki te t�ohu koe me he maunga teitei�<o:p></o:p> <o:p> </o:p> <div style="border-top:solid black 1.0pt;border-left:none;border-bottom:solid black 1.0pt;border-right:none;padding:8.0pt 0cm 8.0pt 0cm;margin-top:15.0pt;margin-bottom:15.0pt"> Notice: This email and any attachments are confidential and may not be used, published or redistributed without the prior written consent of the Institute of Geological and Nuclear Sciences Limited (GNS Science). If received in error please destroy and immediately notify GNS Science. Do not copy or disclose the contents.<o:p></o:p> </div> </div> <div style="border-top: solid 1px black; border-bottom: solid 1px black; padding: 10px 0; margin: 20px 0; font-size: 8pt; font-family: Verdana, Arial, Helvetica, sans-serif;"> Notice: This email and any attachments are confidential and may not be used, published or redistributed without the prior written consent of the Institute of Geological and Nuclear Sciences Limited (GNS Science). If received in error please destroy and immediately notify GNS Science. Do not copy or disclose the contents. </div> <div></div> </body> </html>